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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oropetium_20150105_05508A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family | EIL | ||||||||
Protein Properties | Length: 471aa MW: 52578.5 Da PI: 5.0881 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 175.9 | 4.1e-54 | 39 | 164 | 1 | 127 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 eel +rmwkd+++l+r+ker+++l ++a++++ +++ ++qa rkk+sra DgiLkYM+k mevcna+GfvYgiip+kgkpv Oropetium_20150105_05508A 39 EELARRMWKDRVRLRRIKERQQRLA-LQQAELEKLRQKPVSDQALRKKISRAHDGILKYMIKLMEVCNARGFVYGIIPDKGKPV 121 8********************9865.66667***************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.. CS EIN3 85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqt 127 +gasd++raWWkekv+fd+ngpaai+ky+++n+++++++s + Oropetium_20150105_05508A 122 SGASDNIRAWWKEKVKFDKNGPAAIAKYESENMVAANAQSTGV 164 ***********************************99988755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 6.9E-54 | 39 | 165 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence Send to blast |
MEQLAMIATT ELGDSSDLEV EGIQNLNEND VSDEEIEPEE LARRMWKDRV RLRRIKERQQ 60 RLALQQAELE KLRQKPVSDQ ALRKKISRAH DGILKYMIKL MEVCNARGFV YGIIPDKGKP 120 VSGASDNIRA WWKEKVKFDK NGPAAIAKYE SENMVAANAQ STGVKKGRYG ETYNSSNEYD 180 VDGFEDAPLS TSSKDEQDLS PVVQSPEEHA RKKGREMAYK RSNQIVPNKV GTKEQIKTKR 240 ARHNSTVIES EAHRIVDAPE NSRNMIPDMN RQGQLETPVM ANQIVSFNHG DHTTDAFQHR 300 GDAQVQVHLP GTEVNSFGNT QAADATPVST YIGGQHLPYQ NSDITRSKSG NAFPFDATSS 360 LNNLPSSYQS LPPKQSLPLS MMDHHEVPVG TRAPADNSPY SDHMIDGDNP TSVPGDMQQF 420 IDYPFYGEQD KFVGSSFEGL PLDYISISSP IPDINDLLLH EDDLMEYLGT * |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00649 | PBM | Transfer from LOC_Os09g31400 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001136524.1 | 1e-138 | uncharacterized protein LOC100216639 | ||||
Refseq | XP_008650967.1 | 1e-135 | PREDICTED: uncharacterized protein LOC100216639 isoform X1 | ||||
TrEMBL | A0A0A9DKK8 | 1e-147 | A0A0A9DKK8_ARUDO; Uncharacterized protein | ||||
STRING | GRMZM2G006752_P02 | 1e-135 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3720 | 37 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 2e-52 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | Oropetium_20150105_05508A |